Package: aldvmm 0.8.8

Mark Pletscher

aldvmm: Adjusted Limited Dependent Variable Mixture Models

The goal of the package 'aldvmm' is to fit adjusted limited dependent variable mixture models of health state utilities. Adjusted limited dependent variable mixture models are finite mixtures of normal distributions with an accumulation of density mass at the limits, and a gap between 100% quality of life and the next smaller utility value. The package 'aldvmm' uses the likelihood and expected value functions proposed by Hernandez Alava and Wailoo (2015) <doi:10.1177/1536867X1501500307> using normal component distributions and a multinomial logit model of probabilities of component membership.

Authors:Mark Pletscher [aut, cre, cph], Achim Zeileis [ctb]

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aldvmm.pdf |aldvmm.html✨
aldvmm/json (API)
NEWS

# Install 'aldvmm' in R:
install.packages('aldvmm', repos = c('https://pletschm.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/pletschm/aldvmm/issues

Datasets:
  • utility - Simulated Example Data of Health State Utilities.

On CRAN:

clinical-trialscost-effectivenesseq5dfinite-mixturehealth-economicshtahuilimited-dependent-variablemappingmixture-modelpatient-reported-outcomesquality-of-lifeutilities

27 exports 5 stars 1.27 score 11 dependencies 2 scripts 367 downloads

Last updated 9 months agofrom:0499bb8349. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winOKAug 24 2024
R-4.5-linuxOKAug 24 2024
R-4.4-winOKAug 24 2024
R-4.4-macOKAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:aldvmmaldvmm.checkaldvmm.cvaldvmm.getnamesaldvmm.getparaldvmm.gofaldvmm.graldvmm.initaldvmm.llaldvmm.mmaldvmm.predaldvmm.scaldvmm.sefitaldvmm.sumaldvmm.tmcoef.aldvmmestfun.aldvmmformula.aldvmmmodel.matrix.aldvmmnobs.aldvmmpredict.aldvmmprint.aldvmmresiduals.aldvmmsummary.aldvmmterms.aldvmmupdate.aldvmmvcov.aldvmm

Dependencies:backportscheckmateFormulalatticelmtestnloptrnumDerivoptimxpracmasandwichzoo

Adjusted Limited Dependent Variable Mixture Models of Health State Utilities in R

Mark Pletscher

Rendered fromhtml_vignette.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-10-26
Started: 2023-06-21

Readme and manuals

Help Manual

Help pageTopics
aldvmm: Adjusted Limited Dependent Variable Mixture Modelsaldvmm-package
Fitting Adjusted Limited Dependent Variable Mixture Modelsaldvmm
Checking the Validity of Objects Supplied to 'aldvmm()'aldvmm.check
Numerical Approximation of Covariance Matrixaldvmm.cv
Creating Names of Parameter Vectorsaldvmm.getnames
Extracting Parameters from Parameter Vector into Nested List.aldvmm.getpar
Calculating Goodness of Fit Measuresaldvmm.gof
Calculating Numeric Gradients of the Negative Log-Likelihoodaldvmm.gr
Creating Initial Valuesaldvmm.init
Calculating the Negative Log-Likelihood of the Adjusted Limited Dependent Variable Mixture Modelaldvmm.ll
Creating Design Matricesaldvmm.mm
Predicting Expected Values from Adjusted Limited Dependent Variable Mixture Modelsaldvmm.pred
Calculating analytical Gradients of the Negative Log-Likelihood for each observationaldvmm.sc
Calculating Standard Errors of Fitted and Predicted Outcomesaldvmm.sefit
Creating Summary Tablealdvmm.sum
Creating Terms Objectsaldvmm.tm
Extract Coefficients of Adjusted Limited Dependent Variable Mixture Model Fitscoef.aldvmm
Create Matrix of Adjusted Limited Dependent Variable Mixture Model Gradients per Observationestfun.aldvmm
Extract Adjusted Limited Dependent Variable Mixture Model Formulaformula.aldvmm
Extract Adjusted Limited Dependent Variable Mixture Model Model Matricesmodel.matrix.aldvmm
Extract Adjusted Limited Dependent Variable Mixture Model Number of Observationsnobs.aldvmm
Predict Method for Adjusted Limited Dependent Variable Mixture Model Fitspredict.aldvmm
Print Adjusted Limited Dependent Variable Mixture Model Fitsprint.aldvmm
Printing Adjusted Limited Dependent Variable Mixture Model Summariesprint.summary.aldvmm
Extract Adjusted Limited Dependent Variable Mixture Model Residualsresiduals.aldvmm
Summarizing Adjusted Limited Dependent Variable Mixture Model Fitssummary.aldvmm
Extract Adjusted Limited Dependent Variable Mixture Model Termsterms.aldvmm
Update Adjusted Limited Dependent Variable Mixture Model Fitupdate.aldvmm
Simulated Example Data of Health State Utilities.utility
Extract Adjusted Limited Dependent Variable Mixture Model Covariance Matrixvcov.aldvmm